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Applied Phylogenetics - AP

Publications

673 Publications

Filipa M.S. Martins, Maria J. Feio, Miguel Porto, Ana F. Filipe, Aurélie Bonin, Sónia R.Q. Serra, Paulo C. Alves, Pierre Taberlet, Pedro Beja (2021). Assessing changes in stream macroinvertebrate communities across ecological gradients using morphological versus DNA metabarcoding approaches. Science of The Total Environment, 797, 149030. doi: 10.1016/j.scitotenv.2021.149030 Open publication

Machado L, Salvi D, Harris DJ, Brito JC, Crochet P-A, Geniez P, Ahmadzadeh F, Carranza S (2021). Systematics, biogeography and evolution of the Saharo-Arabian naked-toed geckos genus Tropiocolotes. Molecular Phylogenetics and Evolution, 55: 106969 doi: 10.1016/j.ympev.2020.106969 Open publication

Vonk, F. J., Bittenbinder, M. A., Kerkkamp, H. M. I., Grashof, D. G. B., Archer, J. P., Afonso, S., Richardson, M. K., Kool, J., & van der Meijden, A. (2021). A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied. PLOS ONE, 16(11), e0258712. doi: 10.1371/journal.pone.0258712 Open publication

Cardoso, G. C., Abreu, J. M., Archer, J., Crottini, A., & Mota, P. G. (2020). Independent evolution of song diversity and song motor performance in canaries, goldfinches and allies indicates clade-specific trade-offs in birdsong. Evolution, 74(6), 1170–1185 doi: 10.1111/EVO.13987 Open publication

Andrade, P, Pinho, C, Perez i de Lanuza, G, Afonso, S, Brejcha, J, Rubin, CJ, Wallerman, O, Pereira, P, Sabatino, SJ, Bellati, A, Pellitteri-Rosa, D, Bosakova, Z, Bunikis, I, Carretero, MA, Feiner, N, Marsik, P, Pauperio, F, Salvi, D, Soler, L, While, GM , Uller, T, Font, E, Andersson, L & Carneiro, M (2019). Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard. Proceedings of the National Academy of Sciences, 116(12), 5633-5642. doi: 10.1073/pnas.1820320116 Open publication

Grashof, DGB.; Kerkkamp, HMI.; Afonso, S.; Archer, J.; Harris, DJ.; Richardson, MK.; Vonk, FJ.; van der Meijden, A. (2019). Transcriptome annotation and characterization of novel toxins in six scorpion species. BMC Genomics 20, 645. doi: 10.1186/s12864-019-6013-6 Open publication

Wolff, J. O., Paterno, G. B., Liprandi, D., Ramirez, M. J., Bosia, F., van der Meijden, A., Michalik, P., Smith, H. M., Jones, B. R., Ravelo, A. M., Pugno, N., & Herberstein, M. E. (2019). Evolution of aerial spider webs coincided with repeated structural optimization of silk anchorages. Evolution, 73(10), 2122-2134. doi: 10.1111/evo.13834 Open publication

Bellati A, Scherz MD, Megson S, Roberts SH, Andreone F, Rosa GM, Noel J, Randrianirina JE, Fasola M, Glaw F, Crottini A (2018) Resurrection and re-description of Plethodontohyla laevis (Boettger, 1913) and transfer of Rhombophryne alluaudi (Mocquard, 1901) to the genus Plethodontohyla (Amphibia, Microhylidae, Cophylinae). Zoosystematics and Evolution, 94(1): 109-135. doi: 10.3897/zse.94.14698 Open publication

de Lanuza GPI, Abalos J, Bartolome A, Font E (2018) Through the eye of a lizard: hue discrimination in a lizard with ventral polymorphic coloration. Journal of Experimental Biology, 221(5). doi: 10.1242/jeb.169565 Open publication

Ficetola GF, Barzaghi B, Melotto A, Muraro M, Lunghi E, Canedoli C, Lo Parrino E, Nanni V, Silva-Rocha I, Urso A, Carretero MA, Salvi D, Scali S, Scari G, Pennati R, Andreone F, Manenti R (2018) N-mixture models reliably estimate the abundance of small vertebrates. Scientific Reports, 8. doi: 10.1038/s41598-018-28432-8 Open publication

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