• Research Center in Biodiversity and Genetic Resources

    InBIO Associate Laboratory

    Research Center in  Biodiversity and Genetic Resources
  • Research Center in Biodiversity and Genetic Resources

    InBIO Associate Laboratory

    Research Center in  Biodiversity and Genetic Resources
  • Research Center in Biodiversity and Genetic Resources

    InBIO Associate Laboratory

    Research Center in  Biodiversity and Genetic Resources
  • Research Center in Biodiversity and Genetic Resources

    InBIO Associate Laboratory

    Research Center in  Biodiversity and Genetic Resources
 
Year:  
Type:  
 
Articles in SCI journals
Year: 2016
 
Murias Dos Santos A, Cabezas MP, Tavares AI, Xavier R, Branco M (2016) tcsBU: a tool to extend TCS network layout and visualization. Bioinformatics, 32(4): 627-628.
 
Murphy JC, Jowers MJ, Lehtinen RM, Charles SP, Colli GR, Peres AK, Hendry CR, Pyron RA (2016) Cryptic, Sympatric Diversity in Tegu Lizards of the Tupinambis teguixin Group (Squamata, Sauria, Teiidae) and the Description of Three New Species. PLOS ONE, 11(8): e0158542.
 
Murphy JC, Rutherford MG, Jowers MJ (2016) The threadsnake tangle: lack of genetic divergence in Epictia tenella (Squamata, Leptotyphlopidae): evidence for introductions or recent rafting to the West Indies. Studies on Neotropical Fauna and Environment, 51(3): 197-205.
 
Naimi B, Araujo MB (2016) sdm: a reproducible and extensible R platform for species distribution modelling. Ecography, 39(4): 368-375.
 
Neves F, Abrantes J, Esteves PJ (2016) Evolution of CCL11: genetic characterization in lagomorphs and evidence of positive and purifying selection in mammals. Innate Immunity, 22(5): 336-343.
 
Nourisson C, Muñoz-Merida A, Carneiro M, Sequeira F (2016) De novo transcriptome assembly and polymorphism detection in two highly divergent evolutionary units of Bosca's newt (Lissotriton boscai) endemic to the Iberian Peninsula. Molecular Ecology Resources.
 
Novais A, Souza AT,Ilarri M, Pascoal C, Sousa R (2016) Effects of the invasive clam Corbicula fluminea (Muller, 1774) on an estuarine microbial community. Science of The Total Environment, 566: 1168-1175.
 
Obanda V, Michuki G, Jowers MJ, Rumberia C, Mutinda M, Lwande OW, Wangoru K, Kasiiti-Orengo J, YongoM, Alasaad SA (2016) Complete genomic sequence of virulent pigeon paramyxovirus in laughing doves (Astreptopella senegalensis) in Kenya. Journal of Wildlife Diseases, 52(3): 599-608.
 
Olabarria C, Gestoso I, Lima FP, Vázquez E, Comeau Lc, Gomes F, Seabra R, Babarro JMF (2016) Response of Two Mytilids to a Heatwave: The Complex Interplay of Physiology, Behaviour and Ecological Interactions. Plos One, 11(10): e0164330.
 
Oliveira HR, Tomás D, Silva M, Lopes S, Viegas W, Veloso MM (2016) Genetic Diversity and Population Structure in Vicia faba L. Landraces and Wild Related Species Assessed by Nuclear SSRs. PLoS ONE, 11(5): e0154801.
 
Olivero J, Ferri F, Acevedo P, Lobo JM, Fa JE, Farfan MA, Romero D, Real R (2016) Using indigenous knowledge to link hyper-temporal land cover mapping with land use in the Venezuelan Amazon: "The Forest Pulse". Revista de Biologia Tropical, 64(4): 1661-1682.
 
Paquet M, Doutrelant C, Loubon M, Theron F, Rat M, Covas R (2016) Communal roosting, thermoregulatory benefits and breeding group size predictability in cooperatively breeding sociable weavers. Journal of Avian Biology, 47(6): 749-755.
 
Penado A, Rebelo H, Goulson D (2016) Spatial distribution modelling reveals climatically suitable areas for bumblebees in undersampled parts of the Iberian Peninsula. Insect Conservation and Diversity, 9(5): 391-401.
 
Pennisi R, Salvi D, Brandi V, Angelini R, Ascenzi P, Polticelli F (2016) Molecular Evolution of Alternative Oxidase Proteins: A Phylogenetic and Structure Modeling Approach. Journal of Molecular Evolution, 82(4): 207-218.
 
Peralta D, Leitão I, Ferreira A, Mira A, Beja P, Pita R (2016) Factors affecting southern water vole (Arvicola sapidus) detection and occupancy probabilities in Mediterranean farmland. Mammalian Biology, 81(2): 123-129.
 
Pereira HM (2016) A latitudinal gradient for genetic diversity. Science, 353(6307): 1494-1495.
 
Pereira MC, Moura M, Rego IE, Silva L (2016) Local knowledge of the flora of a region: implications in biodiversity conservation. AIMS Environmental Science, 3(4): 778-803.
 
Pereira RJ, Barreto FS, Pierce NT, Carneiro M, Burton RS (2016) Transcriptome-wide patterns of divergence during allopatric evolution. Molecular Ecology, 25(7): 1478-1493.
 
Perez I de Lanuza G, Font E (2016) The evolution of colour pattern complexity: selection for conspicuousness favours contrasting within-body colour combinations in lizards. Journal of evolutionary biology, 29(5): 942-951.
 
Perez-Losada M, Crandall KA, Freishtat RJ (2016) Two sampling methods yield distinct microbial signatures in the nasopharynges of asthmatic children. Microbiome, 4.
 
Perez-Mendez N, Jordano P, Garcia C, Valido A (2016) The signatures of Anthropocene defaunation: cascading effects of the seed dispersal collapse. Scientific Reports 6: 24820.
 
Piga G, Goncalves D, Thompson TJU, Brunetti A, Malgosa A, Enzo S (2016) Understanding the Crystallinity Indices Behavior of Burned Bones and Teeth by ATR-IR and XRD in the Presence of Bioapatite Mixed with Other Phosphate and Carbonate Phases. International Journal of Spectroscopy, 2016: 4810149.
 
Pinheiro A, Neves F, Lemos de Matos A, Abrantes J, van der Loo W, Mage R, Esteves PJ (2016) An overview of the lagomorph immune system and its genetic diversity. Immunogenetics, 68(2):83-107.
 
Pinho C, Faria R (2016) Magadi tilapia ecological specialization: filling the early gap in the speciation continuum. Molecular Ecology, 25(7): 1420-1422.
 
Pinho P, Correia O, Lecoq M, Munzi S, Vasconcelos S, Gonçalves P, Rebelo R, Antunes C, Silva P, Freitas C, Lopes N, Santos-Reis M, Branquinho C (2016) Evaluating green infrastructure in urban environments using a multi-taxa and functional diversity approach. Environmental Research 147: 601-610.
 
Pinto JC, Oliveira S, Teixeira S, Martins D, Fehn AM, Aco T, Gaya-Vidal M, Rocha J (2016) Food and pathogen adaptations in the Angolan Namib desert: Tracing the spread of lactase persistence and human African trypanosomiasis resistance into southwestern Africa. American Journal of Physical Anthropology, 161(3): 436-447.
 
Pita R, Lambin X, Mira A, Beja P (2016) Hierarchical spatial segregation of two Mediterranean vole species: the role of patch-network structure and matrix composition. Oecologia, 182(1): 253-262.
 
Porraz G, Igreja M, Schmidt P, Parkington J (2016) A shape to the microlithic Robberg from “Ealands Bay Cave” (Western Cape, South Africa), Southern African Humanities, 29: 203-247.
 
Porraz G, Schmid V, Miller C, Tribolo C, Cartwright C, Charrie-Duhaut A, Igreja M, Mentzer S, Mercier N, Schmidt P, Conard N, Texier PJ, Parkingon J (2016) Update on the 2011 excavation at “Elands Bay Cave” (South Africa) and the Verlorenvlei Stone Age. Southern African Humanities, 29: 33-68.
 
Puppo P, Curto M, Meimberg H (2016) Genetic structure of Micromeria (Lamiaceae) in Tenerife, the imprint of geological history and hybridization on within-island diversification. Ecology and Evolution, 6(11): 3443-3460.
 
Queiros J, Vicente J, Alves PC, de la Fuente J, Gortazar C (2016) Tuberculosis, genetic diversity and fitness in the red deer, Cervus elaphus. Infection, Genetics and Evolution, 43: 203-212.
 
Queiroz N, Humphries NE, Mucientes G, Hammerschlag N, Lima FP, Scalese KL, Miller PI, Sousa LL, Seabra R, Sims DW (2016) Ocean-wide tracking of pelagic sharks reveals extent of overlap with longline fishing hotspots. Proceedings of the National Academy of Sciences of the United states of America, 13(6): 1582–1587.
 
Raposeiro PM, Ferreira V, Guri R, Gonçalves V, Martins GM (2016) Leaf litter decomposition on insular lentic systems: effects of macroinvertebrate presence, leaf species, and environmental conditions. Hydrobiologia: 784(1): 65-79.
 
Rato C, Harris DJ, Carranza S, Machado L, Perera A (2016) The taxonomy of the Tarentola mauritanica species complex (Gekkota: Phyllodactylidae): Bayesian species delimitation supports six candidate species. Molecular Phylogenetics and Evolution, 94(A): 271-278.
 
Razgour O, Rebelo H, Di Febbraro M, Russo D (2016) Painting maps with bats: species distribution modelling in bat research and conservation. HYSTRIX-ITALIAN JOURNAL OF MAMMALOGY,
 
Real R, Barbosa AM, Bull JW (2016) Species distributions, Quantum Theory, and the Enhancement of Biodiversity Measures. Systematic Biology.
 
Rebelo AC, Meireles RP, Barbin V, Neto AI, Melo C, Ávila SP (2016) Diagenetic history of lower Pliocene rhodoliths of the Azores Archipelago (NE Atlantic): Application of cathodoluminescence techniques. Micron, 80: 112-121.
 
Rebelo AC, Rasser MW, Kroh A, Johnson ME, Ramalho RS, Melo C, Uchman A, Berning B, Silva L, Zanon V, Neto AI, Cachão M, Ávila SP (2016) Rocking around a volcanic island shelf: Pliocene Rhodolith beds from Malbusca, Santa Maria Island (Azores, NE Atlantic). Facies, 62(3): 1-31
 
Reino L, Borralho R, Arroyo B (2016) Influence of game crops on the distribution and productivity of red-legged partridges Alectoris rufain Mediterranean woodlands. European Journal of Wildlife Research, 1-9.
 
Reino L, Ferreira M, Martínez-Solano I, Segurado P, Xu C, Barbosa AM (2016) Favourable areas for co- occurrence of parapatric species: niche conservatism and niche divergence in Iberian tree frogs and midwife toads. Journal of Biogeography.
 
Resano-Mayor J, Real J, Moleon M, Sanchez-Zapata JA, Palma L, Hernandez-Matias A (2016) Diet-demography relationships in a long-lived predator: from territories to populations. Oikos, 125(2): 262-270.
 
Ribeiro PF, Santos JL, Santana J, Reino L, Beja P, Moreira F (2016) An applied farming systems approach to infer conservation-relevant agricultural practices for agri-environment policy design. Land Use Policy, 58: 165-172.
 
Ribeiro PF, Santos JL, Santana J, Reino L, Leitão PJ, Beja P, Moreira F (2016) Landscape makers and landscape takers: links between farming systems and landscape patterns along an intensification gradient. Landscape Ecology, 31(4): 791-805.
 
Righton D, Westerberg H, Feunteun E, Økland F, Gargan P, Amilhat E, Metcalfe J, Lobon-Cervia J, Sjöberg N, Simon J, Acou A, Vedor M, Walker A, Trancart T, Brämick U, Aarestrup K (2016) Empirical observations of the spawning migration of European eels: The long and dangerous road to the Sargasso Sea. Science Advances 2(10): e1501694.
 
Rio-Maior H, Beja P, Nakamura M, Santos N, Brandão R, Sargo R, Dias I, Silva F, Álvares F (2016) Rehabilitation and post-release monitoring of two wolves with severe injuries. The Journal of Wildlife Management, 80(4): 724-735.
 
Riou V, Fonseca-Batista D, Roukaerts A, Biegala IC, Prakya SR, Loureiro CM, Santos M, Muniz-Piniella AE, Schmiing M, Elskens M, Brion N, Martins MA, Dehairs F (2016) Importance of N-2-Fixation on the Productivity at the North-Western Azores Current/Front System, and the Abundance of Diazotrophic Unicellular Cyanobacteria. Plos One, 11(3): e0150827.
 
Roca V, Jorge F, Ilgaz C, Kumlutas Y, Dürmüş SH, Carretero MA (2016) The intestinal helminth community of the spiny-tailed lizard Darevskia rudis (Squamata, Lacertidae) from northern Turkey. Journal of Helminthology, 90(2): 144-151.
 
Roca V, Jorge F, Ilgaz C, Kumlutas Y, Hakan Durmus S, Carretero MA (2016) Intestinal parasites of unisexual and bisexual lizards Darevskia spp. (Lacertidae) from Northeastern Anatolia. Helminthologia, 53(3): 298-303.
 
Rocha S, Perera A, Silva A, Posada D, Harris DJ (2016) Evolutionary history of Trachylepis skinks in the Seychelles islands: introgressive hybridization, morphological evolution and geographic structure. Biological Journal of the Linnean Society, 119(1): 15-36.
 
Rombke J, Aira M, Backeljau T, Breugelmans K, Dominguez J, Funke E, Graf N, Hajibabaei M, Perez-Losada M, Porto PG, Schmelz RM, Vierna J, Vizcaino A, Pfenninger M (2016) DNA barcoding of earthworms (Eisenia fetida/andrei complex) from 28 ecotoxicological test laboratories. Applied Soil Ecology, 104: 3-11.
 
Romeiras MM, Vieira A, Silva DN, Moura M, Santos-Guerra A, Batista D, Duarte MC, Paulo OS (2016) Evolutionary and Biogeographic Insights on the Macaronesian Beta-Patellifolia Species (Amaranthaceae) from a Time-Scaled Molecular Phylogeny. Plos One, 11(3): e0152456.
 
Romero D, Olivero J, Brito JC, Real R (2016) Comparison of approaches to combine Species Distribution Models based on different sets of predictors. Ecography, 39(6): 561-571.
 
Rosa GM, Bergo PE, Andreone F, Crottini A, Jasper L, Gardner CJ (2016) Insights into the feeding behavior of Madagascarophis meridionalis DOMERGUE, 1987, from Isalo, Madagascar. Herpetozoa, 29(1-2): 103-107.
 
Rosado D, Harris DJ, Perera A, Jorge F, Tome B, Damas-Moreira I, Tavares I, Estrela H, de Sousa A, Pereira A, Mantovani M, Salvi D (2016) Moroccan herpetofauna distribution updates including a DNA barcoding approach. Herpetozoa, 28(3-4): 171-178.
 
Rouco C, Santoro S, Delibes-Mateos M, Villafuerte R (2016) Optimization and accuracy of faecal pellet count estimates of population size: The case of European rabbits in extensive breeding nuclei. Ecological Indicators, 64: 212-216.
 
Sablok G, Perez-Pulido AJ, Do T, Seong TY, Casimiro-Soriguer CS, La Porta N, Ralph PJ, Squartini A, Munoz-Merida A, Harikrishna JA (2016) PlantFuncSSR: Integrating First and Next Generation Transcriptomics for Mining of SSR-Functional Domains Markers. Frontiers in Plant Science, 7.
 
Salvi D, Bisconti R, Canestrelli D (2016) High phylogeographical complexity within Mediterranean islands: insights from the Corsican fire salamander. Journal of Biogeography, 43(1): 92–203.
 
Sanchez-Montes G, Recuero E, Gutierrez-Rodriguez J, Gomez-Mestre I, Martinez-Solano I (2016) Species assignment in the Pelophylax ridibundus x P. perezi hybridogenetic complex based on 16 newly characterised microsatellite markers. Herpetological Journal, 26(2): 99-108.
 
Sannolo M, Gatti F, Mangiacotti M, Scali S, Sacchi R (2016) Photo-identification in amphibian studies: a test of (IS)-S-3 Pattern. Acta Herpetologica, 11(1): 63-68.
 
Santarém F, Bessa AS, Gomes A, Carvalho J, Grosso-Silva J (2016) Pollinators: Europe must block hornet invasion. Nature, 532: 177.