• Research Center in Biodiversity and Genetic Resources

    InBIO Associate Laboratory

    Research Center in  Biodiversity and Genetic Resources
  • Research Center in Biodiversity and Genetic Resources

    InBIO Associate Laboratory

    Research Center in  Biodiversity and Genetic Resources
  • Research Center in Biodiversity and Genetic Resources

    InBIO Associate Laboratory

    Research Center in  Biodiversity and Genetic Resources
  • Research Center in Biodiversity and Genetic Resources

    InBIO Associate Laboratory

    Research Center in  Biodiversity and Genetic Resources
 
Year:  
Type:  
 
Articles in SCI journals
Year: 2016
 
Ferreira S , Boudot JP, El Haissoufi M, Alves PC, Thompson DJ, Brito JC, Watts PC (2016) Genetic distinctiveness of the damselfly Coenagrion puella in North Africa: an overlooked and endangered taxon. Conservation Genetics, 4:1-7.
 
Ferreira V, Raposeiro PM, Pereira A, Cruz AM, Costa AC, Graca MAS, Gonçalves V (2016) Leaf litter decomposition in remote oceanic island streams is driven by microbes and depends on litter quality and environmental conditions. Freshwater Biology, 61(5): 783-799.
 
Ferrero ME, Blanco-Aguiar JA, Davila JA, (2016) Climatic and geographic effects on the spatial genetic pattern of a landbird species (Alectoris rufa) on the Iberian Peninsula. Population Ecology, 58(3): 429-440.
 
Fontanesi L, Di Palma F, Flicek P, Smith AT, Thulin CG, Alves PC, the Lagomorph Genomics Consortium (including Abrantes J, Campos R, Carneiro M, Esteves PJ, Melo-Ferreira J (2016) LaGomiCs—Lagomorph Genomics Consortium: An International Collaborative Effort for Sequencing the Genomes of an Entire Mammalian Order. Journal of Heredity, , 107(4): 295-308.
 
Fourdrilis S, Mardulyn P, Hardy OJ, Jordaens K, Frias Martins AMD, Backeljau T (2016) Mitochondrial DNA hyperdiversity and its potential causes in the marine periwinkle Melarhaphe neritoides (Mollusca: Gastropoda). PEERJ, 4: e2549.
 
Freedman AH, Schweizer RM, Ortega-Del Vecchyo D, Han EJ, Davis BW, Gronau I, Silva PM, Galaverni M, Fan ZX, Marx P, Lorente-Galdos B, Ramirez O, Hormozdiari F, Alkan C, Vila C, Squire K, Geffen E, Kusak J, Boyko AR, Parker HG, Lee C, Tadigotla V, Siepel A, Bustamante CD, Harkins TT, Nelson SF, Marques-Bonet T, Ostrander EA, Wayne RK, Novembre J (2016) Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs. Plos Genetics, 12(3): 5851-5851.
 
Freitas S, Rocha S, Campos J, Ahmadzadeh F, Corti C, Sillero N, Ilgaz Ç, Kumlutaş Y, Arakelyan M, Harris DJ, Carretero MA (2016) Parthenogenesis through the ice ages: A biogeographic analysis of Caucasian rock lizards (genus Darevskia). Molecular Phylogenetics and Evolution, 102: 117-127.
 
Freitas S, Vavakou A, Arakelyan M, Drovetski SV, Crnobrnja-isailovic J, Kidov AA, Cogalniceanu D, Corti C, Lymberakis P, Harris DJ, Carretero MA (2016) Cryptic diversity and unexpected evolutionary patterns in the meadow lizard, Darevskia praticola (Eversmann, 1834). Systematics and Biodiversity, 14(2): 184-197.
 
Froufe E, Prie V, Faria J, Ghamizi M, Goncalves DV, Gurlek ME, Karaouzas I, Kebapci U, Sereflisan H, Sobral C, Sousa R, Teixeira A, Varandas S, Zogaris S, Lopes-Lima M (2016) Phylogeny, phylogeography, and evolution in the Mediterranean region: News from a freshwater mussel (Potomida, Unionida). Molecular Phylogenetics and Evolution, 100: 322-332.
 
Gabriel D, Draisma SGA, Sauvage T, Schmidt WE, Schils T, Lim PK, Harris DJ, Fredericq S (2016) Multilocus phylogeny reveals Gibsmithia hawaiiensis (Dumontiaceae, Rhodophyta) to be a species complex from the Indo-Pacific, with the proposal of G. eilatensis sp. nov. Phytotaxa, 277 (1): 001–020.
 
Garcia C, Escribano-Avila G (2016) An optimised protocol to isolate high-quality genomic DNA from seed tissues streamlines the workflow to obtain direct estimates of seed dispersal distances in gymnosperms. Journal of Plant Research, 129(3): 559-563.
 
Garcia C, Rumeu B, Gonzalez-Perez MA, Nogales M (2016) Reduced reproductive fitness of an endemic insular juniper population: An eco-genetic mediation hypothesis. Biological Conservation, 196: 70-77.
 
Garcia RA, Cabeza M, Altwegg R , Araujo MB (2016) Do projections from bioclimatic envelope models and climate change metrics match? Global Ecology and Biogeography, 25(1): 65-74.
 
Garcia-Callejas D, Araujo MB (2016) The effects of model and data complexity on predictions from species distributions models. Ecological Modelling, 326: 4-12.
 
Gargan LM, Cornette R, Yearsley JM, Montgomery WI, Pauperio J, Alves PC, Butler F, Pascal M, Tresset A, Herrel A, Lusby J, Tosh DG, Searle JB, McDevitt AD (2016) Molecular and morphological insights into the origin of the invasive greater white-toothed shrew (Crocidura russula) in Ireland. Biological Invasions, 18(3): 857-871.
 
Gaspar AR, Hayes G, Ginja C, Ginja MM, Todhunter RJ (2016) The Norberg angle is not an accurate predictor of canine hip conformation based on the distraction index and the dorsolateral subluxation score. Preventive Veterinary Medicine, 135: 47-52.
 
Gaspar R, Ferreira J, Carrondo J, Silva M J, García-Vadillo F J (2016) Open-air Gravettian lithic assemblages from Northeast Portugal: The Foz do Medal site (Sabor valley). Quaternary International, 406: 44-64.
 
Gaubert P, Patel R, Veron G, Goodman S, Willsch M, Vasconcelos R, Lourenço A, Sigaud M, Justy F, Joshi B, Fickel J, Wilting A (2016). Phylogeography of the small Indian civet and origin of introductions to western Indian Ocean islands. Journal of Heredity.
 
Gil A, Pacheco-Vieira C, Yu Q, Lobo A, Calado H (2016) Mapping the ecological structure in oceanic islands the case-study of S. Miguel Island (Portugal). Environmental Engineering and Management Journal, 15(7): 1593-1602.
 
Gjini E, Gomes MGM (2016) Expanding vaccine efficacy estimation with dynamic models fitted to cross-sectional prevalence data post-licensure. Epidemics, 14: 71-82.
 
Gjini E, Valente C, Sa-Leao R, Gomes MGM (2016) How direct competition shapes coexistence and vaccine effects in multi-strain pathogen systems. Journal of Theoretical Biology, 388: 50-60.
 
Godinho R , Borges PAV, Calado H, Broquetas A (2016)Land cover detection with SAR images of Delta del Llobregat. Proceedings of SPIE, FOURTH INTERNATIONAL CONFERENCE ON REMOTE SENSING AND GEOINFORMATION OF THE ENVIRONMENT (RSCY2016), 9688, UNSP 96881M
 
Gomes ACR, Sorenson MD, Cardoso GC (2016) Speciation is associated with changing ornamentation rather than stronger sexual selection. Evolution, 70:2823-2838
 
Gomes E, Capinha C, Rocha J, Sousa C (2016) Mapping Risk of Malaria Transmission in Mainland Portugal Using a Mathematical Modelling Approach. Plos One, 11(11): e0164788.
 
Gomes MGM, Barreto ML, Glaziou P, Medley GF, Rodrigues LC, Wallinga J, Squire SB (2016) End TB strategy: the need to reduce risk inequalities. BMC Infectious Diseases, 16: 132.
 
Gomes MGM, Gjini E, Lopes JS, Souto-Maior C, Rebelo C (2016) A theoretical framework to identify invariant thresholds in infectious disease epidemiology. Journal of Theoretical Biology, 395: 97-102.
 
Gomes MGM, Gordona SB, Lalloo DG (2016) Clinical trials: The mathematics of falling vaccine efficacy with rising disease incidence. Vaccine, 34(27): 3007-3009.
 
Goncalves D, Coelho JD, Acosta MA, Coelho C, Curate F, Ferreira MT, Gouveia M, Makhoul C, Pinto D, Oliveira-Santos I, Vassalo AR, Navega D, Cunha E (2016) One for all and all for one: Linear regression from the mass of individual bones to assess human skeletal mass completeness. American Journal of Physical Anthropology, 160(3): 427-432.
 
Goncalves D, Granja R, Alves-Cardoso F, Carvalho AF (2016) All different, all equal: Evidence of a heterogeneous Neolithic population at the Bom Santo Cave necropolis (Portugal). HOMO - Journal of Comparative Human Biology, 67(3): 203-215.
 
Goncalves DV, Pereira P, Godinho R, Lopes S, Velo-Anton G, Brito JC (2016) Development of 23 microsatellite loci for Boulenger's agama (Agama boulengeri) with partial cross-amplification in other Agama species. Amphibia-Reptilia, 37(2): 246-252.
 
Goncalves J, Alves P, Pocas I, Marcos B, Sousa-Silva R, Lomba A, Honrado JP (2016) Exploring the spatiotemporal dynamics of habitat suitability to improve conservation management of a vulnerable plant species. Biodiversity and Conservation, 25(4): 2867-2888.
 
Goncalves J, Henriques R, Alves P, Sousa-Silva R, Monteiro AT, Lomba A, Marcos B, Honrado J (2016) Evaluating an unmanned aerial vehicle-based approach for assessing habitat extent and condition in fine-scale early successional mountain mosaics. Applied Vegetation Science, 19(1): 132-146.
 
Goncalves M, Pontes A, Almeida P, Barbosa R, Serra M, Libkind D, Hutzler M, Goncalves P, Sampaio JP (2016) Distinct Domestication Trajectories in Top-Fermenting Beer Yeasts and Wine Yeasts. Current Biology, 26(20): 2750-2761.
 
Gonzalez-Plaza JJ, Ortiz-Martin I, Munoz-Merida A, Garcia-Lopez C, Sanchez-Sevilla JF, Luque F, Trelles O, Bejarano ER, De La Rosa R, Valpuesta V, Beuzon CR (2016) Transcriptomic Analysis Using Olive Varieties and Breeding Progenies Identifies Candidate Genes Involved in Plant Architecture. Frontiers in Plant Science, 7:240.
 
Gordinho LD, Hasselquist D, Neto JM (2016) Asymmetric song recognition between recently diverged subspecies of reed bunting. Behavioral Ecology, 27(5): 1413-1423.
 
Gouveia M, Santos I, Santos AL, Goncalves D (2016) Sex diagnosis of the human dentition after heat exposure: the potential of cementum-enamel junction and root dimensions. American Journal of Physical Anthropology, 159(62): 158-159.
 
Groah SLG, Pérez-Losada M, Caldovic l, Ljungberg IH, Sprague BM, Castro-Nallar E, Chandel NJ, Hsieh MH, Pohl HG (2016) Redefining Healthy Urine: A Cross-Sectional Exploratory Metagenomic Study of People With and Without Bladder Dysfunction. The Journal of Urology.
 
Guimaraes-Costa A, Vallinoto M, Giarrizzo T, Pezold F, Schneider H, Sampaio I (2016) Molecular evidence of two new species of Eleotris (Gobiiformes: Eleotridae) in the western Atlantic. Molecular Phylogenetics and Evolution, 98:52-56.
 
Gutiérrez-Rodríguez J, Barbosa AM, Martínez-Solano I (2016) Present and past climatic effects on the current distribution and genetic diversity of the Iberian Spadefoot toad (Pelobates cultripes): an integrative approach. Journal of Biogeography
 
Hagenblad J, Oliveira HR, Forsberg NEG, Leino MW (2016) Geographical distribution of genetic diversity in Secale landrace and wild accessions. BMC Plant Biology, 16: 23.
 
Hahn A, Sanyal A, Perez GF, Colberg-Poley AM, Campos J, Rose MC, Perez-Losada M (2016) Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum. Journal of Microbiological Methods, 130: 95-99.
 
Harris DJ (2016) Does Contraceptive Use Lead to Increased Affairs? A Response to Larmuseau et al. Trends in Ecology & Evolution, 31(9): 663.
 
Harris DJ (2016) Naming no names: Comments on the taxonomy of small piroplasmids in canids. Parasites & vectors, 9(1): 289.
 
Harris DJ, Rosado D, Xavier R (2016) DNA barcoding reveals extensive mislabeling in seafood sold in Portuguese supermarkets. Journal of Aquatic Food Product Technology.
 
Hermoso V, Filipe AF, Segurado P, Beja P (2016) Catchment zoning to unlock freshwater conservation opportunities in the Iberian Peninsula. Diversity and Distributions, 22(9): 960-969.
 
Herrera JM, Salgueiro PA, Medinas D, Costa P, Encarnacao C, Mira A (2016) Generalities of vertebrate responses to landscape composition and configuration gradients in a highly heterogeneous Mediterranean region. Journal of Biogeography, 43(6): 1203-1214.
 
Herrera JM, Teixeira ID, Rodriguez-Perez J, Mira A (2016) Landscape structure shapes carnivore-mediated seed dispersal kernels. Landscape Ecology, 31(4): 731-743.
 
Hilbers JP, Schipper AM, Hendriks AJ, Verones F, Pereira HM, Huijbregts MAJ (2016) An allometric approach to quantify the extinction vulnerability of birds and mammals. Ecology, 97(3): 615-626.
 
Hilton SK, Castro-Nallar E, Perez-Losada M, Toma I, McCaffrey TA, Hoffman EP, Siegel MO, Simon GL, Johnson WE, Crandall KA (2016) Metataxonomic and Metagenomic Approaches vs. Culture-Based Techniques for Clinical Pathology. Frontiers in Microbiology, 7:484.
 
Hindrikson M, Remm J, Pilot M, Godinho R, Stronen AV, Baltrūnaité L, Czarnomska SD, Leonard JA, Randi E, Nowak C, Åkesson M, López-Bao JV, Álvares F, Llaneza L, Echegaray J, Vilà C, Ozolins J, Rungis D, Aspi J, Paule L, Skrbinšek T, Saarma U (2016) Wolf population genetics in Europe: a systematic review, meta-analysis and suggestions for conservation and management. Biological Reviews.
 
Honrado JP, Lomba A, Alves P, Aguiar C, Monteiro‐Henriques T, Cerqueira Y, Monteiro P, Barreto Caldas F (2016) Conservation management of EU priority habitats after collapse of traditional pastoralism: Navigating socioecological transitions in mountain rangeland. Rural Sociology.
 
Honrado JP, Pereira HM, Guisan A (2016) Fostering integration between biodiversity monitoring and modelling. Journal of Applied Ecology, 53(5): 1299-1304.
 
Hughes SJ, Cabral JA, Bastos R, Cortes R, Vicente J, Eitelberg D, Yu HR, Honrado J, Santos M (2016) A stochastic dynamic model to assess land use change scenarios on the ecological status of fluvial water bodies under the Water Framework Directive. Science of The Total Environment, 565:427-439.
 
Ilarri MI, Souza AT, Rosa RS (2016) Community structure of reef fishes in shallow waters of the Fernando de Noronha archipelago: effects of different levels of environmental protection. Marine and Freshwater Research.
 
Kaliontzopoulou A, Adams DC (2016) Phylogenies, the comparative method and the conflation of tempo and mode. Systematic Biology, 65(1):1-15.
 
Kaluzna M, Albuquerque P, Tavares F, Sobiczewski P, Pulawska J (2016) Development of SCAR markers for rapid and specific detection of Pseudomonas syringae pv. morsprunorum races 1 and 2, using conventional and real-time PCR. Applied Microbiology and Biotechnology, 100(8): 3693-3711.
 
Kebede F, Rosenbom S, Khalatbari L, Moehlman PD, Beja-Pereira A, Bekele A (2016) Genetic diversity of the Ethiopian Grevy’s zebra (Equus grevyi) populations that includes a unique population of the Alledeghi Plain. Mitochondrial DNA, 27(1): 397-400.
 
Khimoun A, Arnoux E, Martel G, Pot A, Eraud C, Conde B, Loubon M, Theron F, Covas R, Faivre B, Garnier S (2016) Contrasted patterns of genetic differentiation across eight bird species in the Lesser Antilles. Genetica, 144(1): 125-138.
 
Kide NG, Dunz A, Agnèse JF, Dilyte J, Pariselle A, Carneiro C, Correira E, Saoud Y, Yarba LO, Kone Y, Brito JC, Schliewen UK, Durand JD (2016) Cichlids of the Banc d'Arguin National Park, Mauritania: insight into the diversity of the genus Coptodon. Journal of Fish Biology, 88(4):1369-1393.
 
Lara-Romero C, Garcia C, Morente-Lopez J, Iriondo JM (2016) Direct and indirect effects of shrub encroachment on alpine grasslands mediated by plant-flower visitor interactions. Functional Ecology, 30(9): 1521-1530.